Re: [DIYbio] Viewing bacteria on a molecular level, how to do molecular modeling, and seeking beginner guidance

For producing compounds, it is not neccessary tosee the bacteria. Is your goal to produce compounds or watch bacteria?

Making synthetic compounds is usually harder, or rewuires more computional power I guess. If you want to produce a pore forming enzyme that kills bacteria by leakimg them out, where would you start? Probably taking a domain that is known to bind to an E. coli surface protein and a known pore (like a Colicin). Designing a pore yourself from scratch is hard I guess, where to start. There are countless possibilities, and some of them are effective. On the other hand, nature has shown that X,Y are effective

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