[DIYbio] Re: restriction digest confirmation

top band is a ladder, the largest band is 1.5 kb, and the smallest is 100 bp.  the two lanes beneath it are samples.  the gel was run for about an hour and a half at 60 v and about 50 ma.

On Jul 15, 2013 11:16 PM, inactive.e@gmail.com wrote:

here is a photo of the gel!

On Jul 15, 2013 11:14 PM, "Avery louie" <inactive.e@gmail.com> wrote:

hello all,

i ran a rather silly gel today.  i wanted to see if a double digest had worked, but the fragments should be about 6 bp and 4kb!  so i obviously was not able to resolve both on my mini gel.

i saw a very large fragment, probably around 4 kb on the gel.  if it were plasmid dna, i would expect it to run as a smaller fragment.  it seems to have worked, but i want to check my reasoning with you all.  obviously, this does not prove both digests worked, but it at least suggests that one did.

if i really needed to make sure it was digested, i would run control single cut reactions against plasmid dna, and the double digest, but i dont have a ton of template dna.

--Avery

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