[DIYbio] Looking for homology program online

Hi guys, 


For online codon conversion I like this online converter, http://www.jcat.de/Result.jsp , because a) it has many features and shows you a diagramm of the improved sequence b) it has also  many eukaryotes in it's database. 
(It may be paranoid, but I often check parts of the sequence with the codon wheel to be sure there was no computer error :p )

I'm looking now for a kind of online- homology search where I can insert two sequences, it shows me the homology and maybe show me even homologous sites / motifes. 


Best, 
Andreas

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