Re: [DIYbio] Needed: a list of ways that DIY bio and community labs can positively impact human health

BIoCurious has many Community Projects with an Open Science focus, the
three most active that might apply to your request are:

DIY BioPrinter: meeting for 4 years now with a goal to design an Open
Hardware BioPrinter and a system for DIY communities to explore this
technology. The project is open to collaboration via web conference
with project participants in Vancouver B.C, Florida, and even Brazil
joining in. Project wiki
https://sites.google.com/site/bioprinterwiki/

DIY Microscope: Project to hack a DNA sequencer into a lab microscope
project and will be shared for others to do the same, access to less
expensive microscopy can positively impact many projects. Wiki
https://sites.google.com/site/biocuriousmicroscopewiki/

Real Vegan Cheese: Engineer a cultured food to eventually reduce the
carbon impact of the diary industry. Wiki -
https://wiki.realvegancheese.org/index.php/Real_Vegan_Cheese

Counter Culture Labs in Oakland is working on Open Insulin and attempt
to design a generic (and lower cost) form of insulin.
https://experiment.com/projects/open-insulin

I'm not sure the depth of information you are looking for but I'd be
happy to fill in details for the projects I'm on (those listed above).

-Maria

On Mon, Feb 29, 2016 at 6:43 PM, Scott <synbiofablab@gmail.com> wrote:
> Hello all,
>
> I thought I would throw this question out to the greater DIYbio community.
> As a backgrounder, Public Health Agency of Canada is holding a DIYbio Summit
> in Ottawa on March 16th. Derek Jacoby and I, amongst others, are invited
> panelists at the summit. I believe it will be web-casted (details to
> follow).
>
> We are tasked with putting together a list of ways that DIY bio and
> community labs can positively impact human health. What existing DIYbio
> projects have already met this challenge and what new ideas do you think are
> possible ways that community biolabs can contribute? Are you working on any
> open DIYbio projects in this arena? Links would be greatly appreciated.
>
> some topics: health and the environment, biosensors, antibiotics discovery
> projects, health-related DNA barcoding, water quality biosensors, genomics,
> microbiome, waste treatment.
>
> Cheers,
> Scott
> Open Science Network, Vancouver, BC
>
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[DIYbio] Needed: a list of ways that DIY bio and community labs can positively impact human health

Hello all,

I thought I would throw this question out to the greater DIYbio community. As a backgrounder, Public Health Agency of Canada is holding a DIYbio Summit in Ottawa on March 16th. Derek Jacoby and I, amongst others, are invited panelists at the summit. I believe it will be web-casted (details to follow).

We are tasked with putting together a list of ways that DIY bio and community labs can positively impact human health. What existing DIYbio projects have already met this challenge and what new ideas do you think are possible ways that community biolabs can contribute? Are you working on any open DIYbio projects in this arena? Links would be greatly appreciated.

some topics: health and the environment, biosensors, antibiotics discovery projects, health-related DNA barcoding, water quality biosensors, genomics, microbiome, waste treatment.

Cheers,
Scott
Open Science Network, Vancouver, BC

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Re: [DIYbio] Status/purpose of biohacklabs.org?

That sounds really cool. I recently tried making a complete bibliography of academic litterature on DIY biology (including your thesis) as part of my current proces of writing a masters thesis in sociology about a local DIYbio community. If you're interested it's linked from here http://blog.buethastum.dk/research-on-diy-biology/

I'll start subscribing to your blog. Looking forward to see what future outputs you produce :)

On Monday, February 29, 2016 at 9:25:05 PM UTC+1, Gabriela Sanchez wrote:
As resources: I am a PhD student researching the DIYbio movement. So I have the time and funding. I am part of the Citizen Science Research team at the University of Geneva (http://citizensciences.net/). Hopefully you will be hearing from us more often! 

For the project, we are gathering a worldwide comprehensive database of all DIYbio initiatives.

We are well aware of 'survey fatigue' among DIYbio, therefore we are trying to construct our research in a way that is useful and meaningful for us and for the DIYbio community.


-- 
Gabriela Sanchez

On 29 February 2016 at 18:21:14, Bue Thastum (bueth...@gmail.com) wrote:

Hi Gabriela

Cool initiative. Just from curiosity: What is the character of the data/ressources that you have and want to share?

Cheers, 
Bue


---
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+45 61 70 53 90
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On 29 Feb 2016, at 17:54, Gabriela Sanchez <sab....@gmail.com> wrote:

Any suggestion for the domain? I have been calling this project "DIYbiosphere"; sphere for short. Or could we use a subdomain from the diybio.org website? 

-- 
Gabriela Sanchez

On 29 February 2016 at 17:42:05, Cathal (Phone) (cathal...@cathalgarvey.me) wrote:

If you're going with github at least do register and use a domain or subdomain you can migrate when you upgrade. Nothing worse than linkrot, and you'll lose SEO with the upgrade otherwise.

On 29 February 2016 16:32:17 GMT+00:00, Gabriela Sanchez <sab....@gmail.com> wrote:
So it seems as if Jekyll+Github pages wins? I think that for now it might be the easiest way to start-off... Eventually we can migrate to another git repository manager—like gitlab—and another static site generator—like HUGO, and move it to our own server (eventually is the key word here).

For now, I have the resources to get it started. Anyone interested? Please share your ideas on what should the website have, look like, etc.

-- 
Gabriela Sanchez

On 22 February 2016 at 20:08:37, Bryan Bishop (kan...@gmail.com) wrote:

On Thu, Feb 11, 2016 at 11:20 AM, Mac Cowell <m...@diybio.org> wrote:
Meantime, I suggest we sync the repo to multiple git servers. We could start with github bc it's so easy (and use git-hooks to automatically push it to other servers - calling Bryan Bishop... Please stand up...).

GitHub wiki works as a git repository, push to git@github.com:namespace/whatever.wiki.git (the .wiki.git repo is automatically setup by github). Otherwise, I suggest using ikiwiki for static html compilation from git wiki. This wiki can be hosted as a github repo as well. The github wiki git repository feature does not have all the same features as github git repos, like no pull requests or whatever. Jekyll is probably more friendly than ikiwiki, these days, even lacking the wiki front-end interface. I have found that users are profoundly confused by wikis that don't look like mediawiki's default stylesheet, so jekyll (without wiki features) seems probably fine.

- Bryan
http://heybryan.org/
1 512 203 0507
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Urgent Client Need: Urgent Client Need: Python Engineer; MILPITAS, CALIFORNIA 95035; 12 Months+ Contract

Please send your resumes at niranjan.kumar@vision3solutions.com

 

Hi

 

This is Niranjan from Vision3solutions; hope you are doing well.

Please go through below description and reply with your resume, contact details and current location, if you feel comfortable

 

Job Role: Python Engineer

Location: MILPITAS, CALIFORNIA 95035 UNITED STATES

Duration:  12 Months+ Contract

 

 

CITG division of Client is seeking a candidate with Linux systems experience to write python scripts for Development Operations. Responsibilities will include: involvement with build with Jenkins, in automating the process to make different artifacts, and working with the different docker containers. Ideal candidate should have between 4-10 years overall experience.

 

Minimum requirements:

·         Python Developer - at least 2 years

·         Development Operations - at least 1-2 years

 

Desired Skills:

·         CoreOS /Linux

·         Linux Systems

·         Virtualization

·         Docker

·         Masters degree in Computer Science

 

Thanks& Regards

 

Niranjan Kumar

 

 

Vision3 Solutions Inc

8155 Cavendish Place,Suwanee, GA 30024
Contact No:
(678) 554-4785
Email: niranjan.kumar@vision3solutions.com

                 niruk5503@gmail.com

 

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Re: [DIYbio] Status/purpose of biohacklabs.org?

As resources: I am a PhD student researching the DIYbio movement. So I have the time and funding. I am part of the Citizen Science Research team at the University of Geneva (http://citizensciences.net/). Hopefully you will be hearing from us more often! 

For the project, we are gathering a worldwide comprehensive database of all DIYbio initiatives.

We are well aware of 'survey fatigue' among DIYbio, therefore we are trying to construct our research in a way that is useful and meaningful for us and for the DIYbio community.


-- 
Gabriela Sanchez

On 29 February 2016 at 18:21:14, Bue Thastum (buethastum@gmail.com) wrote:

Hi Gabriela

Cool initiative. Just from curiosity: What is the character of the data/ressources that you have and want to share?

Cheers, 
Bue


---
Bue Thastum
+45 61 70 53 90
skype: buethastum















On 29 Feb 2016, at 17:54, Gabriela Sanchez <sab.gaby@gmail.com> wrote:

Any suggestion for the domain? I have been calling this project "DIYbiosphere"; sphere for short. Or could we use a subdomain from the diybio.org website? 

-- 
Gabriela Sanchez

On 29 February 2016 at 17:42:05, Cathal (Phone) (cathalgarvey@cathalgarvey.me) wrote:

If you're going with github at least do register and use a domain or subdomain you can migrate when you upgrade. Nothing worse than linkrot, and you'll lose SEO with the upgrade otherwise.

On 29 February 2016 16:32:17 GMT+00:00, Gabriela Sanchez <sab.gaby@gmail.com> wrote:
So it seems as if Jekyll+Github pages wins? I think that for now it might be the easiest way to start-off... Eventually we can migrate to another git repository manager—like gitlab—and another static site generator—like HUGO, and move it to our own server (eventually is the key word here).

For now, I have the resources to get it started. Anyone interested? Please share your ideas on what should the website have, look like, etc.

-- 
Gabriela Sanchez

On 22 February 2016 at 20:08:37, Bryan Bishop (kanzure@gmail.com) wrote:

On Thu, Feb 11, 2016 at 11:20 AM, Mac Cowell <mac@diybio.org> wrote:
Meantime, I suggest we sync the repo to multiple git servers. We could start with github bc it's so easy (and use git-hooks to automatically push it to other servers - calling Bryan Bishop... Please stand up...).

GitHub wiki works as a git repository, push to git@github.com:namespace/whatever.wiki.git (the .wiki.git repo is automatically setup by github). Otherwise, I suggest using ikiwiki for static html compilation from git wiki. This wiki can be hosted as a github repo as well. The github wiki git repository feature does not have all the same features as github git repos, like no pull requests or whatever. Jekyll is probably more friendly than ikiwiki, these days, even lacking the wiki front-end interface. I have found that users are profoundly confused by wikis that don't look like mediawiki's default stylesheet, so jekyll (without wiki features) seems probably fine.

- Bryan
http://heybryan.org/
1 512 203 0507
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Re: [DIYbio] Status/purpose of biohacklabs.org?

Hi Gabriela


Cool initiative. Just from curiosity: What is the character of the data/ressources that you have and want to share?

Cheers, 
Bue


---
Bue Thastum
+45 61 70 53 90
skype: buethastum















On 29 Feb 2016, at 17:54, Gabriela Sanchez <sab.gaby@gmail.com> wrote:

Any suggestion for the domain? I have been calling this project "DIYbiosphere"; sphere for short. Or could we use a subdomain from the diybio.org website? 

-- 
Gabriela Sanchez

On 29 February 2016 at 17:42:05, Cathal (Phone) (cathalgarvey@cathalgarvey.me) wrote:

If you're going with github at least do register and use a domain or subdomain you can migrate when you upgrade. Nothing worse than linkrot, and you'll lose SEO with the upgrade otherwise.

On 29 February 2016 16:32:17 GMT+00:00, Gabriela Sanchez <sab.gaby@gmail.com> wrote:
So it seems as if Jekyll+Github pages wins? I think that for now it might be the easiest way to start-off... Eventually we can migrate to another git repository manager—like gitlab—and another static site generator—like HUGO, and move it to our own server (eventually is the key word here).

For now, I have the resources to get it started. Anyone interested? Please share your ideas on what should the website have, look like, etc.

-- 
Gabriela Sanchez

On 22 February 2016 at 20:08:37, Bryan Bishop (kanzure@gmail.com) wrote:

On Thu, Feb 11, 2016 at 11:20 AM, Mac Cowell <mac@diybio.org> wrote:
Meantime, I suggest we sync the repo to multiple git servers. We could start with github bc it's so easy (and use git-hooks to automatically push it to other servers - calling Bryan Bishop... Please stand up...).

GitHub wiki works as a git repository, push to git@github.com:namespace/whatever.wiki.git (the .wiki.git repo is automatically setup by github). Otherwise, I suggest using ikiwiki for static html compilation from git wiki. This wiki can be hosted as a github repo as well. The github wiki git repository feature does not have all the same features as github git repos, like no pull requests or whatever. Jekyll is probably more friendly than ikiwiki, these days, even lacking the wiki front-end interface. I have found that users are profoundly confused by wikis that don't look like mediawiki's default stylesheet, so jekyll (without wiki features) seems probably fine.

- Bryan
http://heybryan.org/
1 512 203 0507
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Re: [DIYbio] Re: Status/purpose of biohacklabs.org?

yeah, I think we could set-up a subdomain. love the name DIYbiosphere. maybe sphere.diybio.org

Jason

On Mon, Feb 29, 2016 at 11:54 AM, Gabriela Sanchez <sab.gaby@gmail.com> wrote:
Any suggestion for the domain? I have been calling this project "DIYbiosphere"; sphere for short. Or could we use a subdomain from the diybio.org website? 

-- 
Gabriela Sanchez

On 29 February 2016 at 17:42:05, Cathal (Phone) (cathalgarvey@cathalgarvey.me) wrote:

If you're going with github at least do register and use a domain or subdomain you can migrate when you upgrade. Nothing worse than linkrot, and you'll lose SEO with the upgrade otherwise.

On 29 February 2016 16:32:17 GMT+00:00, Gabriela Sanchez <sab.gaby@gmail.com> wrote:
So it seems as if Jekyll+Github pages wins? I think that for now it might be the easiest way to start-off... Eventually we can migrate to another git repository manager—like gitlab—and another static site generator—like HUGO, and move it to our own server (eventually is the key word here).

For now, I have the resources to get it started. Anyone interested? Please share your ideas on what should the website have, look like, etc.

-- 
Gabriela Sanchez

On 22 February 2016 at 20:08:37, Bryan Bishop (kanzure@gmail.com) wrote:

On Thu, Feb 11, 2016 at 11:20 AM, Mac Cowell <mac@diybio.org> wrote:
Meantime, I suggest we sync the repo to multiple git servers. We could start with github bc it's so easy (and use git-hooks to automatically push it to other servers - calling Bryan Bishop... Please stand up...).

GitHub wiki works as a git repository, push to git@github.com:namespace/whatever.wiki.git (the .wiki.git repo is automatically setup by github). Otherwise, I suggest using ikiwiki for static html compilation from git wiki. This wiki can be hosted as a github repo as well. The github wiki git repository feature does not have all the same features as github git repos, like no pull requests or whatever. Jekyll is probably more friendly than ikiwiki, these days, even lacking the wiki front-end interface. I have found that users are profoundly confused by wikis that don't look like mediawiki's default stylesheet, so jekyll (without wiki features) seems probably fine.

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Re: [DIYbio] Re: Status/purpose of biohacklabs.org?

Any suggestion for the domain? I have been calling this project "DIYbiosphere"; sphere for short. Or could we use a subdomain from the diybio.org website? 

-- 
Gabriela Sanchez

On 29 February 2016 at 17:42:05, Cathal (Phone) (cathalgarvey@cathalgarvey.me) wrote:

If you're going with github at least do register and use a domain or subdomain you can migrate when you upgrade. Nothing worse than linkrot, and you'll lose SEO with the upgrade otherwise.

On 29 February 2016 16:32:17 GMT+00:00, Gabriela Sanchez <sab.gaby@gmail.com> wrote:
So it seems as if Jekyll+Github pages wins? I think that for now it might be the easiest way to start-off... Eventually we can migrate to another git repository manager—like gitlab—and another static site generator—like HUGO, and move it to our own server (eventually is the key word here).

For now, I have the resources to get it started. Anyone interested? Please share your ideas on what should the website have, look like, etc.

-- 
Gabriela Sanchez

On 22 February 2016 at 20:08:37, Bryan Bishop (kanzure@gmail.com) wrote:

On Thu, Feb 11, 2016 at 11:20 AM, Mac Cowell <mac@diybio.org> wrote:
Meantime, I suggest we sync the repo to multiple git servers. We could start with github bc it's so easy (and use git-hooks to automatically push it to other servers - calling Bryan Bishop... Please stand up...).

GitHub wiki works as a git repository, push to git@github.com:namespace/whatever.wiki.git (the .wiki.git repo is automatically setup by github). Otherwise, I suggest using ikiwiki for static html compilation from git wiki. This wiki can be hosted as a github repo as well. The github wiki git repository feature does not have all the same features as github git repos, like no pull requests or whatever. Jekyll is probably more friendly than ikiwiki, these days, even lacking the wiki front-end interface. I have found that users are profoundly confused by wikis that don't look like mediawiki's default stylesheet, so jekyll (without wiki features) seems probably fine.

- Bryan
http://heybryan.org/
1 512 203 0507
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Re: [DIYbio] Re: Status/purpose of biohacklabs.org?

If you're going with github at least do register and use a domain or subdomain you can migrate when you upgrade. Nothing worse than linkrot, and you'll lose SEO with the upgrade otherwise.

On 29 February 2016 16:32:17 GMT+00:00, Gabriela Sanchez <sab.gaby@gmail.com> wrote:
So it seems as if Jekyll+Github pages wins? I think that for now it might be the easiest way to start-off... Eventually we can migrate to another git repository manager—like gitlab—and another static site generator—like HUGO, and move it to our own server (eventually is the key word here).

For now, I have the resources to get it started. Anyone interested? Please share your ideas on what should the website have, look like, etc.

-- 
Gabriela Sanchez

On 22 February 2016 at 20:08:37, Bryan Bishop (kanzure@gmail.com) wrote:

On Thu, Feb 11, 2016 at 11:20 AM, Mac Cowell <mac@diybio.org> wrote:
Meantime, I suggest we sync the repo to multiple git servers. We could start with github bc it's so easy (and use git-hooks to automatically push it to other servers - calling Bryan Bishop... Please stand up...).

GitHub wiki works as a git repository, push to git@github.com:namespace/whatever.wiki.git (the .wiki.git repo is automatically setup by github). Otherwise, I suggest using ikiwiki for static html compilation from git wiki. This wiki can be hosted as a github repo as well. The github wiki git repository feature does not have all the same features as github git repos, like no pull requests or whatever. Jekyll is probably more friendly than ikiwiki, these days, even lacking the wiki front-end interface. I have found that users are profoundly confused by wikis that don't look like mediawiki's default stylesheet, so jekyll (without wiki features) seems probably fine.

- Bryan
http://heybryan.org/
1 512 203 0507
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