[DIYbio] 15 days Internship Programme Tools and Techniques in Applied Bioinformatics | 19th July - 2nd August 2021


Warm Greetings from BIOCURATION
Bioinformatics is an interdisciplinary field that develops methods and software tools for understanding biological data. The key areas of bioinformatics include biological databases, sequence alignment, gene and promoter prediction, molecular phylogenetics, structural bioinformatics, genomics, and proteomics. 

Course Content:
  1. Literature Search Using Pubmed and Medminer
  2. Sequence Retrieval from Nucleic Acid and Protein Databases
  3. Sequence (FASTA and BLAST) Searches – Analysis of Parameters Affecting Alignment.
  4. Pair Wise and Multiple Alignments of Sequences – Analysis of Parameters Affecting Alignment.
  5. Evolutionary Studies / Phylogenetic Analysis – Identification of Orthologs and Paralogs.
  6. Restriction Mapping, Primer Design and In Silico PCR
  7. Identification of Functional Sites in Genes / Genomes.
  8. Mutation prediction and analysis Find promoter sequences and TFBs in gene
  9. Pattern Elucidation in Proteins Using PROSITE and STRING
  10. PDB Structure Retrieval, Visualization and Protein modeling and structure evaluation
  11. Molecular viewer RASMOL, PyMol and Chimera
  12. Active sites, Motif and Domain prediction of protein
  13. Molecular docking and evaluation: protein-protein docking and protein-ligand docking (Computer aided drug designing)
  14. Microarray data analysis

Benefits In Learning Bioinformatics Key Skills

Generally, a bioinformatics specialist is responsible for managing and analysing large sets of genomic data. The setting where that data analysis takes place can vary quite a bit, however.

In the Pharmaceutical and Biotechnology Industries, work typically involves exploring the human genome to detect how drugs may impact certain proteins within the body's cells. Work often happens in a laboratory setting.

In Botany and Zoology, the analysis focuses on animal and plant genomes and terrestrial data such as elevation and water availability, with an overall focus on environmental health and conservation. Professionals may work in a lab or out in the field.

In academia, bioinformatics careers are related to experiments that may not have an immediate commercial benefit but could be used to drive future investigations in medical or biological research.

Job Profiles

Bioinformatics Software Developer, Research Scientist / Associate, Computational Biologist

Database Programmer, Proteomics, Network Administrator / Analyst, Science Technician

Content Editor, Pharmacogenomics, Professor, Online Platform: Zoom meeting

Who can apply:

Students of UG / PG / Research Scholars / Faculties of all life science (includes Plant Science, Animal Science, Biotechnology, Biochemistry, Microbiology, Bioinformatics)

Seats: 50 (First come first serve basis)

Registration fee: 2000 INR  , for International participant $55 

Registration Form : https://forms.gle/qPnvbZkoHeSXGyLF9


Brochure: https://bit.ly/3qtAXr2

Payee Details

A/C Name: NC Principal account

A/C Number: 033401000050399

Bank Name: IOB, Peter's Road Branch

IFSC Code: IOBA0000334


For International Registration Kindly visit Here :

https://www.biocurations.com/bookings-checkout/15-days-internship-programme 


All those who meet the eligible criteria are required to pay a non – refundable fee of Rs. 2000/- to the above payee details and Register to confirm your participation. 

You can register directly by visiting the link: https://forms.gle/qPnvbZkoHeSXGyLF9 or Scan the given QR Code. Join WhatsApp group for regular updates regarding internship by clicking on the image.

Registration is mandatory to participate in the programme Participants are required to upload the receipt of Fee payment while filling the registration form to complete the registration process.

Details of the Zoom meeting link will be sent to the registered mail ID.

Participants are asked to provide their correct Full name in the registration form as it will be used for Certificates.

Participants from outside Chennai shall receive the certificate through post, hence they are required to fill in correct postal address with Pin code.

For any further Queries and Details contact us.

Contact Person:

mi@biocurations.com | www.biocurations.com


0091 8553794025

     


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Re: Re[4]: [DIYbio] biochem pricing?

I'd guess like John, maybe they don't want to deal with such small quantities, but offer it for convenience. Like if I needed 55 gallons of water, 50 lbs of onions, but only a few grams of salt and pepper. One stop shopping has a convenience charge usually.

Or it could be as Gordana put it, supplements can be extracted from GRAS items (generally recognized as safe) so wouldn't even get to the 95-99% purity level you're talking about. Plus the impurities might not be (well) characterized, because if it was "safe" to begin, who cares what "safe" impurities lie within. The industrial grade might give some impurity spec (i.e. some percent nitrates or phosphates, etc).

On Sun, Jul 4, 2021, 3:44 PM Frank <fgarcia0007@gmail.com> wrote:
that's what I thought but these suppliers are not selling pharmaceutical grade product. only industrial grade at best. which i think no more pure than food grade? which is minimally what goes into a supplement . they offer anywhere from 95%-99% purity although who knows how reliable that is. 

------ Original Message ------
From: "Gordana Ostojic" <gordana.n.ostojic@gmail.com>
Sent: 7/4/2021 6:56:12 AM
Subject: Re: Re[2]: [DIYbio] biochem pricing?

Purity and source. In supplements a compound is usually from organic source and just extracted or concentrated from it. 
Even for synthetic DNA that you order price varies a lot depending on level of purification. 

On Saturday, July 3, 2021 at 1:41:17 PM UTC-5 Frank wrote:
if they didn't want to deal with small quantities then why would they
tell you you can order as little as 1mg. i looked at products where the
price is given per 250mg and per 10g so that may not be it. perhaps
there is actually so little of these ingredients in the supplement
products compared to what they advertise

------ Original Message ------
From: "John Griessen" <jo...@industromatic.com>
To: "diy...@googlegroups.com" <diy...@googlegroups.com>
Sent: 7/3/2021 2:07:20 PM
Subject: Re: [DIYbio] biochem pricing?

>On 7/3/21 1:42 AM, Frank wrote:
>>bulk quantity price for the raw material is several times higher than for the finished product gram for gram. I compared 8 different compounds. So what gives?
>
>Did your RFQ get above a min order quantity?
>Did you ask for 55 gal drums or a 500 grams or 10 grams order?
>
>They probably don't want to deal with small amounts.
>
>-- -- You received this message because you are subscribed to the Google Groups DIYbio group. To post to this group, send email to diy...@googlegroups.com. To unsubscribe from this group, send email to diybio+un...@googlegroups.com. For more options, visit this group at https://groups.google.com/d/forum/diybio?hl=en
>Learn more at http://www.diybio.org
>--- You received this message because you are subscribed to the Google Groups "DIYbio" group.
>To unsubscribe from this group and stop receiving emails from it, send an email to diybio+un...@googlegroups.com.
>To view this discussion on the web visit https://groups.google.com/d/msgid/diybio/bfb3623e-0cac-d1c1-2c63-d8ecdb4ae3fe%40industromatic.com.

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[DIYbio] Lab Robotics Tech for Mosa Meat

Hi all! 

We are hiring for a Lab Robotics Technician at Mosa Meat, a cultured meat/food technology company in the Netherlands. Looking for someone with 2+ years wet lab experience and preferably with experience in hardware or coding. More info here.

Plenty of other roles are open at Mosa Meat as well, including Software Engineer, Bioinformatician, and Junior Scientist. Please share with people who you think could be a good fit. Feel free to message me with questions. Thanks for your help!

Best,
Jane Shmushkis [LinkedIn]
Automation Engineer, Mosa Meat

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Re[4]: [DIYbio] biochem pricing?

that's what I thought but these suppliers are not selling pharmaceutical grade product. only industrial grade at best. which i think no more pure than food grade? which is minimally what goes into a supplement . they offer anywhere from 95%-99% purity although who knows how reliable that is. 

------ Original Message ------
From: "Gordana Ostojic" <gordana.n.ostojic@gmail.com>
Sent: 7/4/2021 6:56:12 AM
Subject: Re: Re[2]: [DIYbio] biochem pricing?

Purity and source. In supplements a compound is usually from organic source and just extracted or concentrated from it. 
Even for synthetic DNA that you order price varies a lot depending on level of purification. 

On Saturday, July 3, 2021 at 1:41:17 PM UTC-5 Frank wrote:
if they didn't want to deal with small quantities then why would they
tell you you can order as little as 1mg. i looked at products where the
price is given per 250mg and per 10g so that may not be it. perhaps
there is actually so little of these ingredients in the supplement
products compared to what they advertise

------ Original Message ------
From: "John Griessen" <jo...@industromatic.com>
To: "diy...@googlegroups.com" <diy...@googlegroups.com>
Sent: 7/3/2021 2:07:20 PM
Subject: Re: [DIYbio] biochem pricing?

>On 7/3/21 1:42 AM, Frank wrote:
>>bulk quantity price for the raw material is several times higher than for the finished product gram for gram. I compared 8 different compounds. So what gives?
>
>Did your RFQ get above a min order quantity?
>Did you ask for 55 gal drums or a 500 grams or 10 grams order?
>
>They probably don't want to deal with small amounts.
>
>-- -- You received this message because you are subscribed to the Google Groups DIYbio group. To post to this group, send email to diy...@googlegroups.com. To unsubscribe from this group, send email to diybio+un...@googlegroups.com. For more options, visit this group at https://groups.google.com/d/forum/diybio?hl=en
>Learn more at http://www.diybio.org
>--- You received this message because you are subscribed to the Google Groups "DIYbio" group.
>To unsubscribe from this group and stop receiving emails from it, send an email to diybio+un...@googlegroups.com.
>To view this discussion on the web visit https://groups.google.com/d/msgid/diybio/bfb3623e-0cac-d1c1-2c63-d8ecdb4ae3fe%40industromatic.com.

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Re: Re[2]: [DIYbio] biochem pricing?

Purity and source. In supplements a compound is usually from organic source and just extracted or concentrated from it. 

Even for synthetic DNA that you order price varies a lot depending on level of purification. 

On Saturday, July 3, 2021 at 1:41:17 PM UTC-5 Frank wrote:
if they didn't want to deal with small quantities then why would they
tell you you can order as little as 1mg. i looked at products where the
price is given per 250mg and per 10g so that may not be it. perhaps
there is actually so little of these ingredients in the supplement
products compared to what they advertise

------ Original Message ------
From: "John Griessen" <jo...@industromatic.com>
To: "diy...@googlegroups.com" <diy...@googlegroups.com>
Sent: 7/3/2021 2:07:20 PM
Subject: Re: [DIYbio] biochem pricing?

>On 7/3/21 1:42 AM, Frank wrote:
>>bulk quantity price for the raw material is several times higher than for the finished product gram for gram. I compared 8 different compounds. So what gives?
>
>Did your RFQ get above a min order quantity?
>Did you ask for 55 gal drums or a 500 grams or 10 grams order?
>
>They probably don't want to deal with small amounts.
>
>-- -- You received this message because you are subscribed to the Google Groups DIYbio group. To post to this group, send email to diy...@googlegroups.com. To unsubscribe from this group, send email to diybio+un...@googlegroups.com. For more options, visit this group at https://groups.google.com/d/forum/diybio?hl=en
>Learn more at http://www.diybio.org
>--- You received this message because you are subscribed to the Google Groups "DIYbio" group.
>To unsubscribe from this group and stop receiving emails from it, send an email to diybio+un...@googlegroups.com.
>To view this discussion on the web visit https://groups.google.com/d/msgid/diybio/bfb3623e-0cac-d1c1-2c63-d8ecdb4ae3fe%40industromatic.com.

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Re[2]: [DIYbio] biochem pricing?

if they didn't want to deal with small quantities then why would they
tell you you can order as little as 1mg. i looked at products where the
price is given per 250mg and per 10g so that may not be it. perhaps
there is actually so little of these ingredients in the supplement
products compared to what they advertise

------ Original Message ------
From: "John Griessen" <john@industromatic.com>
To: "diybio@googlegroups.com" <diybio@googlegroups.com>
Sent: 7/3/2021 2:07:20 PM
Subject: Re: [DIYbio] biochem pricing?

>On 7/3/21 1:42 AM, Frank wrote:
>>bulk quantity price for the raw material is several times higher than for the finished product gram for gram. I compared 8 different compounds. So what gives?
>
>Did your RFQ get above a min order quantity?
>Did you ask for 55 gal drums or a 500 grams or 10 grams order?
>
>They probably don't want to deal with small amounts.
>
>-- -- You received this message because you are subscribed to the Google Groups DIYbio group. To post to this group, send email to diybio@googlegroups.com. To unsubscribe from this group, send email to diybio+unsubscribe@googlegroups.com. For more options, visit this group at https://groups.google.com/d/forum/diybio?hl=en
>Learn more at http://www.diybio.org
>--- You received this message because you are subscribed to the Google Groups "DIYbio" group.
>To unsubscribe from this group and stop receiving emails from it, send an email to diybio+unsubscribe@googlegroups.com.
>To view this discussion on the web visit https://groups.google.com/d/msgid/diybio/bfb3623e-0cac-d1c1-2c63-d8ecdb4ae3fe%40industromatic.com.

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Re: [DIYbio] biochem pricing?

On 7/3/21 1:42 AM, Frank wrote:
> bulk quantity price for the raw material is several times higher than for the finished product gram for gram. I compared 8
> different compounds. So what gives?

Did your RFQ get above a min order quantity?
Did you ask for 55 gal drums or a 500 grams or 10 grams order?

They probably don't want to deal with small amounts.

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[DIYbio] biochem pricing?

Hi everyone, I have a question.

I was looking through an ecommerce platform for biochemicals, including the active ingredients in supplement products where you see the prices from many companies for a given compound like vitamin b12 or nicotinamide riboside or just about anything else . It's called Chembid.com. There are others as well. They sell a range of quantities up to large industrial quantities like kilograms. Wouldn't you expect this to cost way less gram for gram than in a retail supplement product? I figured the cost for example, for 10g of acetyl l-carnitine in this raw form would be significantly less than if I purchased a supplement product from GNC or Vitamin shoppe with the same 10g of acetyl l-carnitine inside. Instead, its the reverse. the bulk quantity price for the raw material is several times higher than for the finished product gram for gram. I compared 8 different compounds. So what gives?

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