[DIYbio] Re: Open Source version of VectorNTI

Benchling (https://benchling.com) is free, pure HTML5 app so there's no installation required. You can check out the demo directly here.
We posted about it just a bit earlier on the DIYBio mailing list. It'll support your plasmid editing needs, as well as sangar sequence trace viewing, basic sequence alignment, primer searching, etc.
Best thing is that it's all online, so you can share sequences with friends and colleagues just via links.



On Saturday, September 28, 2013 8:43:46 PM UTC-7, Dunqiang Liao wrote:
VectorFriends, free for academic researchers. It combines various types of cloning simulations, sequence analysis and data management into one application.

http://www.vectorfriends.com 

On Sunday, February 14, 2010 2:18:47 AM UTC+8, Mackenzie Cowell wrote:
APE - a plasmid editor
http://www.biology.utah.edu/jorgensen/wayned/ape/

Clotho - iGEM project partially by APE, but with additional features for engineering biobricks.
EnzymeX from MekenTosj

I personally recommend clotho: http://vimeo.com/2218118

Cheers,
Mac

On Sat, Feb 13, 2010 at 12:43 PM, Marshall Louis Reaves <marshal...@gmail.com> wrote:
So, Invitrogen did this rather sleazy thing where they got everyone
using VectorNTI because it was free for a long time, and now its not
free, even for academic users.

Does anyone know about any reliable freeware for organizing and
analyzing plasmid sequence data?

Thanks!

MLR

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